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iago-lito
snom
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ccc0a3c8ebd9cdb3b7585df4974881323779771d
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dev
main
default
protected
output
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Created with Raphaël 2.2.0
26
Jun
23
12
7
6
5
12
May
11
25
Apr
13
Dec
2
Apr
Improve error with wrong input separator.
dev main
dev main
Tweak output separator.
Optionally read from stdin with '-'.
Output to stdout instead of file.
Revert output tweaks to simplify core program.
🚧 Tweak output again.. but maybe it's a wrong lead.
output
output
Output id column.
Rename to `snom`. Benjamin and Khalid co-authored.
Test line processing.
Drop utf8 checking and recycle line allocation.
Process btop sequences.
Display number of processed lines.
Control display order of arguments in help menu.
Fix a few clippy warnings.
Allow --columns-used with a header.
Base position and optional nucleotide in qseqid
Prepare for optional btop column input.
Rename Arguments to Config and test skips parsing.
Improve stdout feedback.
Expect header before requiring raw column numbers.
Improve error handling and display.
Split into various modules.
Stop requiring nightly.
Group imports with rustfmt.
Add column numbers and separator as parameters.
Assert that sequences do not start with indels.
Fix bug with insertions just before seeked base.
Final tweaks to make it ready.
Few tests and fixes.
Use index-skid style to find correct base.
Write to output file.
Check that base falls in blast result, or NA out.
Refactor fields reading without macros.
Parst blast line, check seqs lengths equality.
Read input file line by line.
Basic CLI with clap.
Authors, License.
First commit, cargo hello world.
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