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Fst_gds
IBS_gds
Picard_MarkDuplicates
Relatedness_gds
abricate
abyss
accel_align
accel_align_index
bcftools_mpileup_and_call
bcftools_vcfFile_stats
bcftools_vcf_stats
blastn
blastn_ncbi
bowtie
bowtie2
bowtie2_index
bowtie_index
busco
bwa_mem
bwa_mem2
bwa_mem2_index
bwa_mem_index
compare_vcfs
compare_vcfs_inDir_isec
compare_vcfs_isec
cstacks
cutadapt
dada2
dadi
deep_variant
demultiplexing_astrid_cruaud
deseq2
edger
ete_draw_tree
fasta2phylip
fastp
fastq2fasta
fastqc
flash
flye
freebayes
gatk_IndelRealigner
gatk_haplotype_caller
gatk_prepare_fasta
gblocks
genomescope
gstacks
guppy
hisat2
hisat2_index
htseq_count
igv_visualize
interop
iqtree
jellyfish_count
jellyfish_histo
jmodeltest2
kallisto_index
kallisto_quant
lastz
mafft
makeblastdb
map_box
medaka
megahit
metabat
miniasm
minimap2_overlap
minimap2_overlap_self
minimap2_reference
minimap2_reference_bam
mitoz_annotate
mitoz_assemble
mitoz_filter
mitoz_findmitoscaf
moments
muscle
nanoplot_fastq
nanoplot_summary_file
null
octopus
pca_gds
phylip2fasta
populations
process_radtags
quast
racon
radsex_distrib
radsex_map
radsex_process
radsex_processTagged
radsex_signif
raxml_ng
salmon_index
salmon_quant
sam_to_phylip
samtools_addRGbam
samtools_stats
simul_coal
snap