renaming old directory to deprecated

deprecated/HmmCleaner/0.180750

deprecated/R/3.0.3

deprecated/R/3.1.3

deprecated/R/3.2.0

deprecated/R/3.3.1

deprecated/R/3.4.3

deprecated/R/3.4.3-with-jags

deprecated/R/3.5.3

deprecated/R/3.5.3.modified

deprecated/R/3.6.3

deprecated/R/4.0.5

deprecated/abyss-2.0.2

deprecated/atlas

deprecated/bamm2.5.0

deprecated/bcftools/1.10

deprecated/bcftools/1.3

deprecated/beagle-libs-2.1.2

deprecated/blast/2.6.0

deprecated/blast/2.8.1

deprecated/bzip2-1.0.6