This application summarize a mono sample VCF file. First the VCF file is parsed to extract various information (GT, DP, GQ, ...) that are then ploted.
This can be achieved either via a command line with the 2 scripts or via a shiny application.
Name | Last commit | Last update |
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README.md | ||
app.R | ||
parseVCF.sh | ||
plotVCF.R |
This application summarize a mono sample VCF file. First the VCF file is parsed to extract various information (GT, DP, GQ, ...) that are then ploted.
This can be achieved either via a command line with the 2 scripts or via a shiny application.