Commits · 9406e8a025219d7e65df1785070b55ff1a1a86ec · edna / benchmark_pipelines

Dec 06, 2019
- update optimal pipeline · 9406e8a0
  root authored 5 years ago
  
  9406e8a0
- update optimal pipeline · 685af521
  root authored 5 years ago
  
  685af521
- Merge branch 'master' of github.com:lmathon/eDNA--benchmark_pipelines · 3edc2779
  root authored 5 years ago
  
  3edc2779
- add -j 16 in cutadapt · be38ac7f
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- Merge pull request #33 from lmathon/mega_modif · 4510286a
  peguerin authored 5 years ago
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- update paired end fastq files URL Mega link · 944daeae
  peguerin authored 5 years ago
  
  944daeae
- update readme · 391ac043
  root authored 5 years ago
  
  391ac043
- update readme · 3e5d6200
  root authored 5 years ago
  
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- update input · 792b90b3
  root authored 5 years ago
  
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- add Tags for optimal_pipeline · 398ec0bc
  root authored 5 years ago
  
  398ec0bc
- Merge pull request #32 from lmathon/fix_opti_workflow · 01572ae2
  peguerin authored 5 years ago
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- Merge pull request #31 from lmathon/refix_flexbar · 27846e53
  peguerin authored 5 years ago
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- move to current dir · c1db7da4
  peguerin authored 5 years ago
  
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- move to current dir · 25cd9c04
  peguerin authored 5 years ago
  
  25cd9c04
- move to current dir · 1fca1a14
  peguerin authored 5 years ago
  
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- move to current dir · 089a01d1
  peguerin authored 5 years ago
  
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- tags cutadapt files · 8c7e5ee8
  peguerin authored 5 years ago
  
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- test parallel command adapter · b98fcc53
  peguerin authored 5 years ago
  
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- adapter truc · 67c361de
  peguerin authored 5 years ago
  
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- version OK · c4daa1f7
  peguerin authored 5 years ago
  
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Dec 05, 2019
- add folder outputs · a0e10598
  root authored 5 years ago
  
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- add script optimal_pipeline · 91da721b
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- rename folder · 8cd0e535
  root authored 5 years ago
  
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- remove tests folder · f1de30e8
  root authored 5 years ago
  
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- update all scripts · 97893468
  root authored 5 years ago
  
  97893468
Dec 04, 2019
- reformat primer fasta files · 6fe6ae3b
  peguerin authored 5 years ago
  
  6fe6ae3b
Dec 03, 2019
- test flexbar · 50782de4
  peguerin authored 5 years ago
  
  50782de4
- oups deja fait par laeti · b2ca3f5e
  peguerin authored 5 years ago
  
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- add adapter fasta · 809b36d1
  peguerin authored 5 years ago
  
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- la bonne commande flexbar · d8db5358
  peguerin authored 5 years ago
  
  d8db5358
Dec 02, 2019
- flexbar commande qui fonctionne · 5962dad9
  peguerin authored 5 years ago
  
  5962dad9
- test folder flexbar · 71f96b7c
  peguerin authored 5 years ago
  
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- test flexbar FIRST TRY · db6c7339
  peguerin authored 5 years ago
  
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Nov 21, 2019
- correct name errors · b92221a7
  root authored 5 years ago
  
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- test tally derep · 743694f1
  peguerin authored 5 years ago
  
  743694f1
- add test for tally derep · 188b90c5
  peguerin authored 5 years ago
  
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- first contact with this script lol · 8c35a32f
  peguerin authored 5 years ago
  
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- Merge pull request #29 from lmathon/fix_filter_prinseq · 70794ce9
  peguerin authored 5 years ago
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- test prinseq · 5be01c66
  peguerin authored 5 years ago
  
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- debug prinseq · ff3dd65a
  peguerin authored 5 years ago
  
  ff3dd65a