diff --git a/orthofinder/orthofinder.py b/orthofinder/orthofinder.py
index 2694d6f4e85e285aeb459f1b19c1379c0006984a..50b2e80632e9abef78790f4a16f3919b6686951a 100755
--- a/orthofinder/orthofinder.py
+++ b/orthofinder/orthofinder.py
@@ -501,7 +501,8 @@ class WaterfallMethod:
                 Bij = blast_file_processor.GetBLAST6Scores(seqsInfo, blastDir_list, seqsInfo.speciesToUse[iSpecies], seqsInfo.speciesToUse[jSpecies], qDoubleBlast=qDoubleBlast)  
                 Bij = WaterfallMethod.NormaliseScores(Bij, Lengths, iSpecies, jSpecies)
                 if qNormalize:
-                    WaterfallMethod.WriteNewScores(seqsInfo, blastDir_list, Bij, iSpecies, qDoubleBlast=qDoubleBlast)
+                    #WaterfallMethod.WriteNewScores(seqsInfo, blastDir_list, Bij, iSpecies, qDoubleBlast=qDoubleBlast)
+                    WaterfallMethod.WriteNewScores(seqsInfo, blastDir_list, Bij, seqsInfo.speciesToUse[iSpecies], qDoubleBlast=qDoubleBlast)
                 Bi.append(Bij)
             matrices.DumpMatrixArray("B", Bi, iSpecies)
             BH = GetBH_s(Bi, seqsInfo, iSpecies)
@@ -867,7 +868,8 @@ def PrintHelp(prog_caller):
    
     print("")   
     print("WORKFLOW RESTART COMMANDS:") 
-    print(" -b  <dir>         Start OrthoFinder from pre-computed BLAST results in <dir>")   
+    print(" -b  <dir>         Start OrthoFinder from pre-computed BLAST results in <dir>")
+    print(" -N  <dir>         Normalize Blast scores from pre-computed BLAST results in <dir>, then exit")
     print(" -fg <dir>         Start OrthoFinder from pre-computed orthogroups in <dir>")
     print(" -ft <dir>         Start OrthoFinder from pre-computed gene trees in <dir>")
     
@@ -950,7 +952,7 @@ def ProcessArgs(prog_caller):
     Start from:
     -f: 1,2,..,6    (start from fasta files, --fasta)
     -b: 4,5,6       (start from blast results, --blast)
-    -N: 3.b          (start from blast results, --normalize)
+    -N: 3.b         (start from blast results, --normalize)
     -fg: 5,6        (start from orthogroups/do orthologue workflow, --from-groups)
     -ft: 6          (start from gene tree/do reconciliation, --from-trees)
     Stop at: