From 1d723ba2d506afda7e192a0bbf20794f2ff89faf Mon Sep 17 00:00:00 2001
From: remy <remy.dernat@umontpellier.fr>
Date: Fri, 29 Nov 2019 14:31:10 +0100
Subject: [PATCH] debug commented - just in case
---
orthofinder/scripts/scnorm.py | 4 ++++
1 file changed, 4 insertions(+)
diff --git a/orthofinder/scripts/scnorm.py b/orthofinder/scripts/scnorm.py
index 2f656bc..b65297f 100644
--- a/orthofinder/scripts/scnorm.py
+++ b/orthofinder/scripts/scnorm.py
@@ -159,7 +159,11 @@ class scnorm:
NormBS = selfHitNormBlastScore
newrows = []
# retrieve value from plot https://code-examples.net/en/q/8863d1
+ # for debug purpose
+ #print(repr(f))
+ #print(repr(f[iSpeciesOpen]))
all_plots = f[iSpeciesOpen][0].get_xydata()
+ #print(repr(all_plots))
error_margin = 0.2
#line = 0
print("Compute back 0.0 normalized score for self-hits for species %d %d" % (iSpeciesOpen, iSpeciesOpen))
--
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