From f61290f9c602b91590dd09191367d15d0c1e7bf9 Mon Sep 17 00:00:00 2001
From: khalid <khalid.belkhir@umontpellier.fr>
Date: Sat, 27 Nov 2021 17:33:10 +0100
Subject: [PATCH] debuh guppy
---
tools/guppy/guppy.rule.snakefile | 1 +
1 file changed, 1 insertion(+)
diff --git a/tools/guppy/guppy.rule.snakefile b/tools/guppy/guppy.rule.snakefile
index a70930dd..8aa89bb0 100644
--- a/tools/guppy/guppy.rule.snakefile
+++ b/tools/guppy/guppy.rule.snakefile
@@ -10,6 +10,7 @@ rule <step_name>__guppy:
command = config["<step_name>__guppy_command"],
gpu_num_callers = config["<step_name>__guppy_gpu_num_callers"],
gpu_runners_per_device = config["<step_name>__guppy_gpu_runners_per_device"],
+ config_file = config["<step_name>__guppy_config_file"],
log:
config["results_dir"]+'/logs/' + config["<step_name>__guppy_output_dir"] + '/guppy_log.txt',
shell:
--
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