From 84fe4348c08ebd198f85856077541bb5b4c97ebc Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?R=C3=A9my=20Dernat?= <remy.dernat@umontpellier.fr>
Date: Wed, 14 Oct 2020 12:02:22 +0200
Subject: [PATCH] adding HmmCleaner
---
envfiles/HmmCleaner/0.180750 | 46 ++++++++++++++++++++++++++++++++++++
1 file changed, 46 insertions(+)
create mode 100644 envfiles/HmmCleaner/0.180750
diff --git a/envfiles/HmmCleaner/0.180750 b/envfiles/HmmCleaner/0.180750
new file mode 100644
index 0000000..b00bcf0
--- /dev/null
+++ b/envfiles/HmmCleaner/0.180750
@@ -0,0 +1,46 @@
+#%Module######################################################################
+#
+# 20201014 HmmCleaner 0.180750 modulefile
+#
+
+proc ModulesHelp { } {
+puts stderr "This modulefile defines the library paths and"
+puts stderr "include paths needed to use HmmCleaner 0.180750"
+puts stderr "The program HmmCleaner.pl 0.180750"
+puts stderr "is added to PATH."
+}
+
+set rel [uname release]
+global prodlist
+set prodlist { singularity/3.5.3 }
+
+
+set is_module_rm [module-info mode remove]
+
+catch {set modulehomes $env(MODULEPATH)}
+if { [ module-info mode load ] } {
+ foreach prod $prodlist {
+ foreach mfilehome [ split $modulehomes :] {
+ if { [file exists $mfilehome/$prod] } {
+ module load $prod
+ }
+ }
+ }
+}
+
+if { [ module-info mode remove ] } {
+ foreach prod $prodlist {
+ foreach mfilehome [ split $modulehomes :] {
+ if { [file exists $mfilehome/$prod] } {
+ module unload $prod
+ }
+ }
+ }
+}
+
+
+
+# aliases not passing through SGE. Would need to source a file...
+prepend-path PATH /share/apps/sing-images/3.5.3
+
+append-path PE_PRODUCT_LIST HmmCleaner-0.180750
--
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