diff --git a/Dockerfile b/Dockerfile index ab8b2123eb2ac4477929cff2dcc37d4f96d17d43..af6edae2912531818a6cf38c046a667d3ebd2eb8 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,7 +1,4 @@ -FROM mmassaviol/mbb_workflows_base:latest - -COPY files /workflow -COPY sagApp /sagApp +FROM mmassaviol/mbb_workflows_base:latest as alltools RUN cd /opt/biotools \ && wget http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-0.38.zip \ @@ -61,3 +58,10 @@ RUN mkdir -p /share/apps/bin \ EXPOSE 3838 CMD ["Rscript", "-e", "setwd('/sagApp/'); shiny::runApp('/sagApp/app.R',port=3838 , host='0.0.0.0')"] + + +FROM alltools + +COPY files /workflow +COPY sagApp /sagApp +