diff --git a/server/opt_home.R b/server/opt_home.R index 4ceca3f35540ea41d27fc4275575eb4e25aaa1b7..4abdf40217ba5c796d7eec1f56b54bf91254e7f3 100755 --- a/server/opt_home.R +++ b/server/opt_home.R @@ -477,9 +477,9 @@ createWorkflows <- function(result, haveR, haveConda) { result <- paste0(result, "\n") result <- paste(result, "\techo \'export PATH=/opt/conda/bin:$PATH\' > /etc/profile.d/conda.sh && \\", - "\twget --quiet https://repo.continuum.io/miniconda/Miniconda2-4.0.5-Linux-x86_64.sh -O ~/miniconda.sh && \\", - "\t/bin/bash ~/miniconda.sh -b -p /opt/conda && \\", - "\trm ~/miniconda.sh", sep = "\n") + "\twget --quiet https://repo.continuum.io/miniconda/Miniconda2-4.0.5-Linux-x86_64.sh -O ./miniconda.sh && \\", + "\t/bin/bash ./miniconda.sh -b -p /opt/conda && \\", + "\trm ./miniconda.sh", sep = "\n") result <- paste0(result, "\n") @@ -538,9 +538,9 @@ createWorkflows <- function(result, haveR, haveConda) { result <- paste0(result, "\n") result <- paste(result, "RUN echo \'export PATH=/opt/conda/bin:$PATH\' > /etc/profile.d/conda.sh && \\", - "\twget --quiet https://repo.continuum.io/miniconda/Miniconda2-4.0.5-Linux-x86_64.sh -O ~/miniconda.sh && \\", - "\t/bin/bash ~/miniconda.sh -b -p /opt/conda && \\", - "\trm ~/miniconda.sh", sep = "\n") + "\twget --quiet https://repo.continuum.io/miniconda/Miniconda2-4.0.5-Linux-x86_64.sh -O ./miniconda.sh && \\", + "\t/bin/bash ./miniconda.sh -b -p /opt/conda && \\", + "\trm ./miniconda.sh", sep = "\n") result <- paste0(result, "\n") @@ -606,9 +606,9 @@ createBiocontainer <- function(result, haveR) { result <- paste0(result, "\n") result <- paste(result, "\techo \'export PATH=/opt/conda/bin:$PATH\' > /etc/profile.d/conda.sh && \\", - "\twget --quiet https://repo.continuum.io/miniconda/Miniconda2-4.0.5-Linux-x86_64.sh -O ~/miniconda.sh && \\", - "\t/bin/bash ~/miniconda.sh -b -p /opt/conda && \\", - "\trm ~/miniconda.sh", sep = "\n") + "\twget --quiet https://repo.continuum.io/miniconda/Miniconda2-4.0.5-Linux-x86_64.sh -O ./miniconda.sh && \\", + "\t/bin/bash ./miniconda.sh -b -p /opt/conda && \\", + "\trm ./miniconda.sh", sep = "\n") result <- paste0(result, "\n") @@ -655,9 +655,9 @@ createBiocontainer <- function(result, haveR) { result <- paste0(result, "\n") result <- paste(result, "RUN echo \'export PATH=/opt/conda/bin:$PATH\' > /etc/profile.d/conda.sh && \\", - "\twget --quiet https://repo.continuum.io/miniconda/Miniconda2-4.0.5-Linux-x86_64.sh -O ~/miniconda.sh && \\", - "\t/bin/bash ~/miniconda.sh -b -p /opt/conda && \\", - "\trm ~/miniconda.sh", sep = "\n") + "\twget --quiet https://repo.continuum.io/miniconda/Miniconda2-4.0.5-Linux-x86_64.sh -O ./miniconda.sh && \\", + "\t/bin/bash ./miniconda.sh -b -p /opt/conda && \\", + "\trm ./miniconda.sh", sep = "\n") result <- paste0(result, "\n")