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Here is a version of the pipeline "only_obitools" using nextflow, a reactive workflow framework and a programming DSL that eases writing computational pipelines with complex data.

Here, we reproduce the bioinformatics pipeline used by SPYGEN to generate species environmental presence from raw eDNA data.

A program to detect potential cross contaminations in HTS assembled transcriptomes using expression level quantification

A program to detect potential cross contaminations in HTS assembled transcriptomes using expression level quantification

esthievo

Fork-type Parallel computing with R

Tool to check if a new version of an R package (you might be developing) breaks any package which depends on it.

Bash script and optional simple web interface to run R CMD CHECK on every package that depends on the package to test.