From 743694f1c08a2f0912041a456cf8c70c40849fcf Mon Sep 17 00:00:00 2001
From: peguerin <pierre-edouard.guerin@cefe.cnrs.fr>
Date: Thu, 21 Nov 2019 17:07:13 +0100
Subject: [PATCH] test tally derep

---
 03_dereplication/test/test_derep_tally.sh | 6 ++++++
 1 file changed, 6 insertions(+)
 create mode 100644 03_dereplication/test/test_derep_tally.sh

diff --git a/03_dereplication/test/test_derep_tally.sh b/03_dereplication/test/test_derep_tally.sh
new file mode 100644
index 0000000..9148711
--- /dev/null
+++ b/03_dereplication/test/test_derep_tally.sh
@@ -0,0 +1,6 @@
+source 98_infos/config.sh
+tally=${SINGULARITY_EXEC_CMD}" "${EDNATOOLS_SIMG}" tally"
+ALL_SAMPLE_SEQ_UNIQ=$(pwd)/03_dereplication/test/01_vsearch/grinder_teleo1_all_sample_clean.uniq.fasta
+
+
+$tally --fasta-in --fasta-out -i ${ALL_SAMPLE_SEQ_UNIQ} -o test
\ No newline at end of file
-- 
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