diff --git a/03_dereplication/test/test_derep_tally.sh b/03_dereplication/test/test_derep_tally.sh new file mode 100644 index 0000000000000000000000000000000000000000..91487114c13f9972be6140004288e6ddf6956c6c --- /dev/null +++ b/03_dereplication/test/test_derep_tally.sh @@ -0,0 +1,6 @@ +source 98_infos/config.sh +tally=${SINGULARITY_EXEC_CMD}" "${EDNATOOLS_SIMG}" tally" +ALL_SAMPLE_SEQ_UNIQ=$(pwd)/03_dereplication/test/01_vsearch/grinder_teleo1_all_sample_clean.uniq.fasta + + +$tally --fasta-in --fasta-out -i ${ALL_SAMPLE_SEQ_UNIQ} -o test \ No newline at end of file