From 1fca1a148d56d00108d4aa32266e6c13623bd875 Mon Sep 17 00:00:00 2001
From: peguerin <pierre-edouard.guerin@cefe.cnrs.fr>
Date: Fri, 6 Dec 2019 14:26:28 +0100
Subject: [PATCH] move to current dir

---
 99_utils/submitjob_sge_cluster/bash2sge.sh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/99_utils/submitjob_sge_cluster/bash2sge.sh b/99_utils/submitjob_sge_cluster/bash2sge.sh
index 0f77c1e..5a04734 100644
--- a/99_utils/submitjob_sge_cluster/bash2sge.sh
+++ b/99_utils/submitjob_sge_cluster/bash2sge.sh
@@ -38,7 +38,7 @@ sed -e "s/JOB_NAME/$nom_qsub_script/g" \
 -e "s|OUT_FILE|$run_output/$nom_qsub_script\.out|g" \
 -e "s|ERR_FILE|$run_output/$nom_qsub_script\.err|g" \
 $template_script  > $qsub_script/temp_script.sh
-echo -e "cd "$(pwd)"\n"
+echo -e "cd "$(pwd)"\n" >> $qsub_script/temp_script.sh
 echo -e "bash $location_bash_script/$nom_bash_script.sh\n" >> $qsub_script/temp_script.sh
 mv $qsub_script/temp_script.sh $qsub_script/$nom_qsub_script".sh"
 echo $qsub_script/$nom_qsub_script".sh is ready to be qsubmitted."
-- 
GitLab